/CEMT/A34002_3_lane_gembs/C2MEJACXX_7_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 343060152 | 100.00 % | 171530076 | 100.00 % | 171530076 | 100.00 % |
| General Reads | 338819684 | 98.76 % | 170209127 | 99.23 % | 168610557 | 98.30 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 209502 | 0.06 % | 105056 | 0.06 % | 104446 | 0.06 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4030966 | 1.18 % | 1215893 | 0.71 % | 2815073 | 1.64 % |
| Bisulfite_reads C2T | 173755095 | 50.65 % | 87269290 | 50.88 % | 86485805 | 50.42 % |
| Bisulfite_reads G2A | 165274091 | 48.18 % | 83044893 | 48.41 % | 82229198 | 47.94 % |
| Concept | Value |
|---|---|
| Unique Fragments | 141719529 |
| Average Unique | 82.62 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 13681756881 | 39.49 % | 5426253877 | 31.32 % | 8255503004 | 47.65 % |
| Base Counts Overall C | 3532100859 | 10.19 % | 114370285 | 0.66 % | 3417730574 | 19.73 % |
| Base Counts Overall G | 3562731984 | 10.28 % | 3450535313 | 19.92 % | 112196671 | 0.65 % |
| Base Counts Overall T | 13516151701 | 39.01 % | 8160599039 | 47.10 % | 5355552662 | 30.91 % |
| Base Counts Overall N | 356333927 | 1.03 % | 172779162 | 1.00 % | 183554765 | 1.06 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9959947983665753 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 162152219 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 171530076 |
| 100 | 171530076 |
| Insert Size Histogram |
|---|
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