{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 51396419, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 45463832, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 88.46, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 30192492, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 29883561, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.98, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 35840666, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 18514140, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.516568
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 23667246, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 546531, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.023092
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 35839757, 
            "distinct_read_pairs": 17790904, 
            "one_read_pair": 8620541, 
            "two_read_pair": 4334059, 
            "NRF": 0.496401, 
            "PBC1": 0.484548, 
            "PBC2": 1.989023
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 23661556, 
            "distinct_read_pairs": 23125333, 
            "one_read_pair": 22620948, 
            "two_read_pair": 492565, 
            "NRF": 0.977338, 
            "PBC1": 0.978189, 
            "PBC2": 45.924798
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 17326526, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 17326526, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 23120715, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23120715, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 139859, 
        "Np": 0, 
        "N_opt": 139859, 
        "N_consv": 139859, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 120, 
            "corr_est_frag_len": 0.131291261310752, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1336656, 
            "argmin_corr": 1500, 
            "min_corr": 0.1245342, 
            "NSC": 1.054259, 
            "RSC": 0.7399793
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.267801760825
        }, 
        "rep1-pr1": {
            "FRiP": 0.268778827204
        }, 
        "rep1-pr2": {
            "FRiP": 0.268281226913
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.191497373237
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.198408063039, 
            "auc": 0.486952066131, 
            "ch_div": 0.237555330745, 
            "elbow_pt": 1.81830235745e-49, 
            "jsd": 0.651341333216, 
            "syn_auc": 0.487725762915, 
            "syn_elbow_pt": 0.200108310736, 
            "syn_jsd": 0.33855697138
        }
    ]
}