{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 40852817, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 40079118, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.11, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 33727822, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33338513, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.85, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 32178111, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7738408, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.240487
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 26694393, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2379185, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.089127
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 32163284, 
            "distinct_read_pairs": 24704384, 
            "one_read_pair": 18892922, 
            "two_read_pair": 4527568, 
            "NRF": 0.768093, 
            "PBC1": 0.76476, 
            "PBC2": 4.172863
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 26662848, 
            "distinct_read_pairs": 24381216, 
            "one_read_pair": 22320027, 
            "two_read_pair": 1887838, 
            "NRF": 0.914427, 
            "PBC1": 0.91546, 
            "PBC2": 11.823063
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 24439703, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24439703, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 24315208, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24315208, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 21775, 
        "Np": 0, 
        "N_opt": 21775, 
        "N_consv": 21775, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 170, 
            "corr_est_frag_len": 0.165272906159233, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1606157, 
            "argmin_corr": 1500, 
            "min_corr": 0.1476763, 
            "NSC": 1.119157, 
            "RSC": 1.35993
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0445229303049
        }, 
        "rep1-pr1": {
            "FRiP": 0.062460082859
        }, 
        "rep1-pr2": {
            "FRiP": 0.0622733594577
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0393722377257
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.28717868136, 
            "auc": 0.489010590901, 
            "ch_div": 0.145037526941, 
            "elbow_pt": 4.04595824213e-70, 
            "jsd": 0.515818495164, 
            "syn_auc": 0.492920235834, 
            "syn_elbow_pt": 0.0677617607908, 
            "syn_jsd": 0.228457340666
        }
    ]
}
