{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 28239437, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24483511, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 86.7, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 70487123, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 69295770, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.31, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 19567692, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4856861, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.248208
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 55281222, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7308436, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.132205
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 19566952, 
            "distinct_read_pairs": 15527831, 
            "one_read_pair": 12328763, 
            "two_read_pair": 2530208, 
            "NRF": 0.793574, 
            "PBC1": 0.793978, 
            "PBC2": 4.872628
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 55254110, 
            "distinct_read_pairs": 48143407, 
            "one_read_pair": 41936725, 
            "two_read_pair": 5470108, 
            "NRF": 0.871309, 
            "PBC1": 0.871079, 
            "PBC2": 7.666526
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 14710831, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 14710831, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 47972786, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 47972786, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 113007, 
        "Np": 0, 
        "N_opt": 113007, 
        "N_consv": 113007, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.166736204198325, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1516791, 
            "argmin_corr": 1500, 
            "min_corr": 0.1438408, 
            "NSC": 1.159172, 
            "RSC": 2.92098
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.346438965755
        }, 
        "rep1-pr1": {
            "FRiP": 0.291546218117
        }, 
        "rep1-pr2": {
            "FRiP": 0.291295956776
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.246381257855
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.166312512466, 
            "auc": 0.485809567726, 
            "ch_div": 0.312394037299, 
            "elbow_pt": 1.07799854264e-41, 
            "jsd": 0.728061722274, 
            "syn_auc": 0.489222725227, 
            "syn_elbow_pt": 0.254487337252, 
            "syn_jsd": 0.363749188065
        }
    ]
}