{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 64111368, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 42179484, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 65.79, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 32467920, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32164608, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.07, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 33977512, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 10953080, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.322363
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 25482309, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7324182, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.287422
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 33976760, 
            "distinct_read_pairs": 23258982, 
            "one_read_pair": 15696486, 
            "two_read_pair": 5291059, 
            "NRF": 0.684556, 
            "PBC1": 0.674857, 
            "PBC2": 2.966606
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 25474265, 
            "distinct_read_pairs": 18313277, 
            "one_read_pair": 13024757, 
            "two_read_pair": 3890155, 
            "NRF": 0.718893, 
            "PBC1": 0.711219, 
            "PBC2": 3.348133
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 23024432, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23024432, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 18158127, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 18158127, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 67574, 
        "Np": 0, 
        "N_opt": 67574, 
        "N_consv": 67574, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 185, 
            "corr_est_frag_len": 0.162435486625777, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1515649, 
            "argmin_corr": 1500, 
            "min_corr": 0.1419519, 
            "NSC": 1.144299, 
            "RSC": 2.130823
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.129442738634
        }, 
        "rep1-pr1": {
            "FRiP": 0.154801280998
        }, 
        "rep1-pr2": {
            "FRiP": 0.155371296927
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.109571316229
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.244830546415, 
            "auc": 0.488683403386, 
            "ch_div": 0.166320120598, 
            "elbow_pt": 4.57783752311e-66, 
            "jsd": 0.604847513065, 
            "syn_auc": 0.505257185281, 
            "syn_elbow_pt": 0.125523096327, 
            "syn_jsd": 0.292064895196
        }
    ]
}