{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 52124869, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 50123919, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.16, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 93302523, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 92119294, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.73, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 39595684, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5187072, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.131001
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 73080965, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5252452, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.071872
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 39595431, 
            "distinct_read_pairs": 34467651, 
            "one_read_pair": 29952733, 
            "two_read_pair": 3985061, 
            "NRF": 0.870496, 
            "PBC1": 0.86901, 
            "PBC2": 7.516255
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 73064709, 
            "distinct_read_pairs": 67929624, 
            "one_read_pair": 63252335, 
            "two_read_pair": 4367277, 
            "NRF": 0.929719, 
            "PBC1": 0.931145, 
            "PBC2": 14.483243
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 34408612, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34408612, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 67828513, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 67828513, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 46904, 
        "Np": 0, 
        "N_opt": 46904, 
        "N_consv": 46904, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 175, 
            "corr_est_frag_len": 0.171887323877881, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1747961, 
            "argmin_corr": 1500, 
            "min_corr": 0.1642057, 
            "NSC": 1.04678, 
            "RSC": 0.7253403
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.10871564603
        }, 
        "rep1-pr1": {
            "FRiP": 0.097710163531
        }, 
        "rep1-pr2": {
            "FRiP": 0.0979043021942
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0467652429948
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.265423694409, 
            "auc": 0.490749336695, 
            "ch_div": 0.141724979008, 
            "elbow_pt": 2.06857038091e-99, 
            "jsd": 0.581388700068, 
            "syn_auc": 0.499574153437, 
            "syn_elbow_pt": 0.126031284805, 
            "syn_jsd": 0.268539360288
        }
    ]
}
