{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 51795067, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 44562611, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 86.04, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 33656196, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32937945, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.87, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 35249885, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 12870289, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.365116
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 26374768, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 12331559, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.467551
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 35247595, 
            "distinct_read_pairs": 22780056, 
            "one_read_pair": 14571145, 
            "two_read_pair": 5370373, 
            "NRF": 0.646287, 
            "PBC1": 0.639645, 
            "PBC2": 2.713246
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 26335696, 
            "distinct_read_pairs": 14298335, 
            "one_read_pair": 7572240, 
            "two_read_pair": 3697936, 
            "NRF": 0.542926, 
            "PBC1": 0.529589, 
            "PBC2": 2.047694
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 22379596, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22379596, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 14043209, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 14043209, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 39288, 
        "Np": 0, 
        "N_opt": 39288, 
        "N_consv": 39288, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.165790026287513, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1509928, 
            "argmin_corr": 1500, 
            "min_corr": 0.1402549, 
            "NSC": 1.182062, 
            "RSC": 2.378044
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0499201901851
        }, 
        "rep1-pr1": {
            "FRiP": 0.124434494285
        }, 
        "rep1-pr2": {
            "FRiP": 0.124446202107
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0363579286985
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.235000071803, 
            "auc": 0.488525736921, 
            "ch_div": 0.195845845646, 
            "elbow_pt": 3.09588777362e-64, 
            "jsd": 0.607008760951, 
            "syn_auc": 0.513158227443, 
            "syn_elbow_pt": 0.0891063212009, 
            "syn_jsd": 0.286945953476
        }
    ]
}