{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 40494334, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 39270583, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.98, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 63896868, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 63166899, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.86, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 30878493, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5823330, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.188589
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 50532331, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 9277067, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.183587
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 30878137, 
            "distinct_read_pairs": 25144155, 
            "one_read_pair": 20334546, 
            "two_read_pair": 4015444, 
            "NRF": 0.814303, 
            "PBC1": 0.808719, 
            "PBC2": 5.064084
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 50500465, 
            "distinct_read_pairs": 41535801, 
            "one_read_pair": 34172222, 
            "two_read_pair": 6119327, 
            "NRF": 0.822484, 
            "PBC1": 0.822717, 
            "PBC2": 5.58431
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 25055163, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25055163, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 41255264, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 41255264, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 37099, 
        "Np": 0, 
        "N_opt": 37099, 
        "N_consv": 37099, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.169446426723119, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1634289, 
            "argmin_corr": 1500, 
            "min_corr": 0.1569311, 
            "NSC": 1.07975, 
            "RSC": 1.926089
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.142476903091
        }, 
        "rep1-pr1": {
            "FRiP": 0.103557121115
        }, 
        "rep1-pr2": {
            "FRiP": 0.103661292488
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0636951669432
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.235764355578, 
            "auc": 0.489154163974, 
            "ch_div": 0.196931074124, 
            "elbow_pt": 5.1297459346e-72, 
            "jsd": 0.622476133353, 
            "syn_auc": 0.51159276539, 
            "syn_elbow_pt": 0.128331058534, 
            "syn_jsd": 0.288334194657
        }
    ]
}