{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 47405727, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 46496423, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.08, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 35464829, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 35130101, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.06, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 39250404, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7740366, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.197205
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 27946878, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3100391, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.110939
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 39247728, 
            "distinct_read_pairs": 31814528, 
            "one_read_pair": 25712877, 
            "two_read_pair": 5003110, 
            "NRF": 0.810608, 
            "PBC1": 0.808212, 
            "PBC2": 5.139379
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 27923826, 
            "distinct_read_pairs": 24930620, 
            "one_read_pair": 22265151, 
            "two_read_pair": 2397267, 
            "NRF": 0.892808, 
            "PBC1": 0.893085, 
            "PBC2": 9.287723
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 31510038, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 31510038, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 24846487, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24846487, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 125065, 
        "Np": 0, 
        "N_opt": 125065, 
        "N_consv": 125065, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 185, 
            "corr_est_frag_len": 0.192150414092012, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1844271, 
            "argmin_corr": 1500, 
            "min_corr": 0.1645662, 
            "NSC": 1.167617, 
            "RSC": 1.388872
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.423386650523
        }, 
        "rep1-pr1": {
            "FRiP": 0.422185100052
        }, 
        "rep1-pr2": {
            "FRiP": 0.422131870491
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.403700206059
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.168870978869, 
            "auc": 0.490330553222, 
            "ch_div": 0.182012659594, 
            "elbow_pt": 6.84083674172e-91, 
            "jsd": 0.798196227713, 
            "syn_auc": 0.491483567845, 
            "syn_elbow_pt": 0.315220376825, 
            "syn_jsd": 0.442225042326
        }
    ]
}
