/EXTERNAL BLUEPRINT/K006308_K006318_18_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1260439680 | 100.00 % | 630219840 | 100.00 % | 630219840 | 100.00 % |
| General Reads | 1147230540 | 91.02 % | 570397536 | 90.51 % | 576833004 | 91.53 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 22426214 | 1.78 % | 11235158 | 1.78 % | 11191056 | 1.78 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 90782926 | 7.20 % | 48587146 | 7.71 % | 42195780 | 6.70 % |
| Bisulfite_reads C2T | 623459675 | 49.46 % | 310277220 | 49.23 % | 313182455 | 49.69 % |
| Bisulfite_reads G2A | 546197079 | 43.33 % | 271355474 | 43.06 % | 274841605 | 43.61 % |
| Concept | Value |
|---|---|
| Unique Fragments | 407522111 |
| Average Unique | 64.66 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 44871655084 | 34.91 % | 18904947195 | 29.42 % | 25966707889 | 40.41 % |
| Base Counts Overall C | 19192873536 | 14.93 % | 1765785989 | 2.75 % | 17427087547 | 27.12 % |
| Base Counts Overall G | 19837720912 | 15.44 % | 17863037847 | 27.80 % | 1974683065 | 3.07 % |
| Base Counts Overall T | 43340234673 | 33.72 % | 25090836017 | 39.05 % | 18249398656 | 28.40 % |
| Base Counts Overall N | 1276170925 | 0.99 % | 634720517 | 0.99 % | 641450408 | 1.00 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9986239611793799 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 540090055 |
| Mapping Quality Histogram |
|---|
| |
| Insert Size Histogram |
|---|
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| LANE REPORTS |
|---|
| S00DCS.Bisulfite-Seq.DNA_Methylation.EGAX00001208462_17 |
| S00DCS.Bisulfite-Seq.DNA_Methylation.EGAX00001208472.cnag-blueprint-17_C3R02ACXX |