/EXTERNAL BLUEPRINT/methylation/K006308_K006318_18_lane_gembs
BACK
SAMPLE K006308_K006318_18_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
26116472 |
15868533 |
60.76 % |
| NonRefCpG |
357801 |
105309 |
29.43 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
6710582 |
15.23 % |
4233048 |
13.40 % |
130848 |
23.10 % |
27143 |
10.91 % |
| Intermediate (0.3-0.7) |
9737499 |
22.09 % |
5130499 |
16.24 % |
160635 |
28.36 % |
51265 |
20.61 % |
| Methylated (0.7-1) |
27624343 |
62.68 % |
22236900 |
70.37 % |
274912 |
48.54 % |
170323 |
68.48 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.800 |
|
0.840 |
|
0.680 |
|
0.830 |
|