{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 38329151, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34545673, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 90.13, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 37534001, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 37173424, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.04, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 27429783, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5458756, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.199008
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 29680236, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4760123, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.16038
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 27428857, 
            "distinct_read_pairs": 23521599, 
            "one_read_pair": 20296301, 
            "two_read_pair": 2749674, 
            "NRF": 0.857549, 
            "PBC1": 0.862879, 
            "PBC2": 7.381348
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 29673292, 
            "distinct_read_pairs": 25067852, 
            "one_read_pair": 21158454, 
            "two_read_pair": 3350903, 
            "NRF": 0.844795, 
            "PBC1": 0.844047, 
            "PBC2": 6.314254
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 21971027, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21971027, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 24920113, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24920113, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 23156, 
        "Np": 0, 
        "N_opt": 23156, 
        "N_consv": 23156, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 170, 
            "corr_est_frag_len": 0.177825277624789, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1937179, 
            "argmin_corr": 1500, 
            "min_corr": 0.1621532, 
            "NSC": 1.09665, 
            "RSC": 0.4965076
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.068736563662
        }, 
        "rep1-pr1": {
            "FRiP": 0.0704958955447
        }, 
        "rep1-pr2": {
            "FRiP": 0.0700898923782
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0209360175422
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.265816060995, 
            "auc": 0.491291137198, 
            "ch_div": 0.154126364025, 
            "elbow_pt": 2.54704769973e-112, 
            "jsd": 0.57378632236, 
            "syn_auc": 0.503397446776, 
            "syn_elbow_pt": 0.0740441427686, 
            "syn_jsd": 0.263086359044
        }
    ]
}