{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 39881099, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38455250, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.42, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 31805250, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 31155763, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.96, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 30517022, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 19171732, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.628231
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 24538558, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 12299602, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.501236
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 30515331, 
            "distinct_read_pairs": 11680478, 
            "one_read_pair": 3692069, 
            "two_read_pair": 3062408, 
            "NRF": 0.382774, 
            "PBC1": 0.316089, 
            "PBC2": 1.20561
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 24507651, 
            "distinct_read_pairs": 12430162, 
            "one_read_pair": 6219984, 
            "two_read_pair": 3090051, 
            "NRF": 0.507195, 
            "PBC1": 0.500394, 
            "PBC2": 2.012907
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 11345290, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 11345290, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 12238956, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 12238956, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 77246, 
        "Np": 0, 
        "N_opt": 77246, 
        "N_consv": 77246, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.124623620131788, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1123337, 
            "argmin_corr": 1500, 
            "min_corr": 0.1038219, 
            "NSC": 1.20036, 
            "RSC": 2.443875
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.262847964465
        }, 
        "rep1-pr1": {
            "FRiP": 0.233442559485
        }, 
        "rep1-pr2": {
            "FRiP": 0.233652391046
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.177467331097
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.165470334937, 
            "auc": 0.483887734041, 
            "ch_div": 0.35547629425, 
            "elbow_pt": 3.55008692146e-32, 
            "jsd": 0.648904181345, 
            "syn_auc": 0.49532690167, 
            "syn_elbow_pt": 0.180941385441, 
            "syn_jsd": 0.339318365754
        }
    ]
}
