{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 33660578, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26404489, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 78.44, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 42663799, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 42244682, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.02, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 21455985, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4792315, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.223356
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 33391312, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5468711, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.163776
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 21455570, 
            "distinct_read_pairs": 16801760, 
            "one_read_pair": 13119390, 
            "two_read_pair": 2915854, 
            "NRF": 0.783095, 
            "PBC1": 0.780834, 
            "PBC2": 4.49933
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 33380476, 
            "distinct_read_pairs": 28041908, 
            "one_read_pair": 23505874, 
            "two_read_pair": 3880792, 
            "NRF": 0.840069, 
            "PBC1": 0.838241, 
            "PBC2": 6.056979
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 16663670, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 16663670, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 27922601, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27922601, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 68991, 
        "Np": 0, 
        "N_opt": 68991, 
        "N_consv": 68991, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 280, 
            "corr_est_frag_len": 0.168956831619893, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1625532, 
            "argmin_corr": 1500, 
            "min_corr": 0.152715, 
            "NSC": 1.106354, 
            "RSC": 1.650887
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.369932847144
        }, 
        "rep1-pr1": {
            "FRiP": 0.324122888297
        }, 
        "rep1-pr2": {
            "FRiP": 0.323674637344
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.310895777296
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.16664503647, 
            "auc": 0.486694192395, 
            "ch_div": 0.285174759184, 
            "elbow_pt": 1.54678781187e-47, 
            "jsd": 0.711926249665, 
            "syn_auc": 0.505625173881, 
            "syn_elbow_pt": 0.25382528146, 
            "syn_jsd": 0.383132467684
        }
    ]
}