/EXTERNAL BLUEPRINT/K006309_K006319_21_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1234427474 | 100.00 % | 617213737 | 100.00 % | 617213737 | 100.00 % |
| General Reads | 1174440755 | 95.14 % | 587782973 | 95.23 % | 586657782 | 95.05 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 23735741 | 1.92 % | 11887048 | 1.93 % | 11848693 | 1.92 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 36250978 | 2.94 % | 17543716 | 2.84 % | 18707262 | 3.03 % |
| Bisulfite_reads C2T | 651083744 | 52.74 % | 326038286 | 52.82 % | 325045458 | 52.66 % |
| Bisulfite_reads G2A | 547092752 | 44.32 % | 273631735 | 44.33 % | 273461017 | 44.31 % |
| Concept | Value |
|---|---|
| Unique Fragments | 423043819 |
| Average Unique | 68.54 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 42884285887 | 34.09 % | 18209084450 | 28.95 % | 24675201437 | 39.23 % |
| Base Counts Overall C | 19510545070 | 15.51 % | 1189559140 | 1.89 % | 18320985930 | 29.13 % |
| Base Counts Overall G | 19763833693 | 15.71 % | 18488744966 | 29.40 % | 1275088727 | 2.03 % |
| Base Counts Overall T | 42377285810 | 33.69 % | 24380431802 | 38.77 % | 17996854008 | 28.62 % |
| Base Counts Overall N | 1248052178 | 0.99 % | 624180961 | 0.99 % | 623871217 | 0.99 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9987800625369769 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 557276579 |
| Mapping Quality Histogram |
|---|
| |
| Insert Size Histogram |
|---|
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| LANE REPORTS |
|---|
| S00DVR.Bisulfite-Seq.DNA_Methylation.EGAX00001208463.cnag-blueprint-17_C3PFRACXX |
| S00DVR.Bisulfite-Seq.DNA_Methylation.EGAX00001208473_20 |