{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 38686090, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38152660, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.62, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 28905606, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28613734, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.99, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 30121757, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5445465, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.180782
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 22794008, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2001549, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.08781
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 30121222, 
            "distinct_read_pairs": 24817639, 
            "one_read_pair": 20371307, 
            "two_read_pair": 3728603, 
            "NRF": 0.823925, 
            "PBC1": 0.82084, 
            "PBC2": 5.463523
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 22782756, 
            "distinct_read_pairs": 20851336, 
            "one_read_pair": 19108648, 
            "two_read_pair": 1598385, 
            "NRF": 0.915224, 
            "PBC1": 0.916423, 
            "PBC2": 11.954972
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 24676292, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24676292, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 20792459, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 20792459, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 18423, 
        "Np": 0, 
        "N_opt": 18423, 
        "N_consv": 18423, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 185, 
            "corr_est_frag_len": 0.168601810442485, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.168837, 
            "argmin_corr": 1500, 
            "min_corr": 0.1548916, 
            "NSC": 1.088515, 
            "RSC": 0.9831377
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0391189766513
        }, 
        "rep1-pr1": {
            "FRiP": 0.0453207488293
        }, 
        "rep1-pr2": {
            "FRiP": 0.0455070038114
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0247636859521
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.28655517278, 
            "auc": 0.489064528856, 
            "ch_div": 0.143951904737, 
            "elbow_pt": 8.01596919722e-71, 
            "jsd": 0.519591182269, 
            "syn_auc": 0.504438119768, 
            "syn_elbow_pt": 0.0553467877102, 
            "syn_jsd": 0.226978487942
        }
    ]
}