{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 35284126, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34873676, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.84, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 26231267, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 25930846, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.85, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 28825067, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7988558, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.277139
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 20790196, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2364405, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.113727
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 28821960, 
            "distinct_read_pairs": 21037757, 
            "one_read_pair": 15249093, 
            "two_read_pair": 4288710, 
            "NRF": 0.729921, 
            "PBC1": 0.724844, 
            "PBC2": 3.555636
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 20778739, 
            "distinct_read_pairs": 18512654, 
            "one_read_pair": 16522190, 
            "two_read_pair": 1772263, 
            "NRF": 0.890942, 
            "PBC1": 0.892481, 
            "PBC2": 9.322651
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 20836509, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 20836509, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 18425791, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 18425791, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 65229, 
        "Np": 0, 
        "N_opt": 65229, 
        "N_consv": 65229, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.209336607689786, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1879789, 
            "argmin_corr": 1500, 
            "min_corr": 0.1612175, 
            "NSC": 1.298473, 
            "RSC": 1.798082
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.343779804832
        }, 
        "rep1-pr1": {
            "FRiP": 0.352399721616
        }, 
        "rep1-pr2": {
            "FRiP": 0.352627550709
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.324765812703
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.167660361119, 
            "auc": 0.488107329251, 
            "ch_div": 0.23612982682, 
            "elbow_pt": 9.88557930561e-60, 
            "jsd": 0.752206232231, 
            "syn_auc": 0.494895913302, 
            "syn_elbow_pt": 0.309528196914, 
            "syn_jsd": 0.427442153949
        }
    ]
}