{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 53541387, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 52425630, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.92, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 33090690, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32705031, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.83, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 41528286, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 23027203, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.554494
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 26020150, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2726887, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.104799
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 41525978, 
            "distinct_read_pairs": 19033658, 
            "one_read_pair": 8408905, 
            "two_read_pair": 4815094, 
            "NRF": 0.458355, 
            "PBC1": 0.441791, 
            "PBC2": 1.746364
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 26018259, 
            "distinct_read_pairs": 23402144, 
            "one_read_pair": 21062942, 
            "two_read_pair": 2121729, 
            "NRF": 0.899451, 
            "PBC1": 0.900043, 
            "PBC2": 9.927254
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 18501083, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 18501083, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 23293263, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23293263, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 105632, 
        "Np": 0, 
        "N_opt": 105632, 
        "N_consv": 105632, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 185, 
            "corr_est_frag_len": 0.157152827780509, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1352599, 
            "argmin_corr": 1500, 
            "min_corr": 0.1276386, 
            "NSC": 1.231232, 
            "RSC": 3.872615
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.319285017915
        }, 
        "rep1-pr1": {
            "FRiP": 0.297871976998
        }, 
        "rep1-pr2": {
            "FRiP": 0.297860517531
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.254460327218
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.18277358262, 
            "auc": 0.487367359444, 
            "ch_div": 0.250864699085, 
            "elbow_pt": 7.82048643172e-53, 
            "jsd": 0.665226501178, 
            "syn_auc": 0.494704038505, 
            "syn_elbow_pt": 0.222173847935, 
            "syn_jsd": 0.366537307828
        }
    ]
}