{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 59464947, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 58509725, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.39, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 34883406, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34265458, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.23, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 45630559, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 26121792, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.572463
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 27351165, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7770921, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.284117
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 45630039, 
            "distinct_read_pairs": 20097622, 
            "one_read_pair": 8458340, 
            "two_read_pair": 5117254, 
            "NRF": 0.440447, 
            "PBC1": 0.420863, 
            "PBC2": 1.652906
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 27343269, 
            "distinct_read_pairs": 19758452, 
            "one_read_pair": 14150560, 
            "two_read_pair": 4147607, 
            "NRF": 0.722608, 
            "PBC1": 0.716178, 
            "PBC2": 3.411741
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 19508767, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 19508767, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 19580244, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 19580244, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 38767, 
        "Np": 0, 
        "N_opt": 38767, 
        "N_consv": 38767, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 220, 
            "corr_est_frag_len": 0.156025812446342, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1452467, 
            "argmin_corr": 1500, 
            "min_corr": 0.1296294, 
            "NSC": 1.20363, 
            "RSC": 1.690204
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.20756421314
        }, 
        "rep1-pr1": {
            "FRiP": 0.200059092051
        }, 
        "rep1-pr2": {
            "FRiP": 0.2004149361
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.166302757776
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.209268255466, 
            "auc": 0.487705075026, 
            "ch_div": 0.225477533818, 
            "elbow_pt": 7.92055453032e-56, 
            "jsd": 0.671740234398, 
            "syn_auc": 0.496625654755, 
            "syn_elbow_pt": 0.184100164629, 
            "syn_jsd": 0.330536579128
        }
    ]
}