/EXTERNAL BLUEPRINT/K006304_K006315_17_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1099816778 | 100.00 % | 549908389 | 100.00 % | 549908389 | 100.00 % |
| General Reads | 1043990054 | 94.92 % | 522462328 | 95.01 % | 521527726 | 94.84 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 20146729 | 1.83 % | 10094246 | 1.84 % | 10052483 | 1.83 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 35679995 | 3.24 % | 17351815 | 3.16 % | 18328180 | 3.33 % |
| Bisulfite_reads C2T | 557977076 | 50.73 % | 279286108 | 50.79 % | 278690968 | 50.68 % |
| Bisulfite_reads G2A | 506159707 | 46.02 % | 253270466 | 46.06 % | 252889241 | 45.99 % |
| Concept | Value |
|---|---|
| Unique Fragments | 411407728 |
| Average Unique | 74.81 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 40283251202 | 35.94 % | 16280345720 | 29.05 % | 24002905482 | 42.83 % |
| Base Counts Overall C | 15381515653 | 13.72 % | 928663440 | 1.66 % | 14452852213 | 25.79 % |
| Base Counts Overall G | 15759617567 | 14.06 % | 14790829073 | 26.39 % | 968788494 | 1.73 % |
| Base Counts Overall T | 39557259150 | 35.29 % | 23493855383 | 41.92 % | 16063403767 | 28.66 % |
| Base Counts Overall N | 1114068772 | 0.99 % | 554162556 | 0.99 % | 559906216 | 1.00 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9988825652291055 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 506775333 |
| Mapping Quality Histogram |
|---|
| |
| Insert Size Histogram |
|---|
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| LANE REPORTS |
|---|
| S00BJM.Bisulfite-Seq.DNA_Methylation.EGAX00001208458_16 |
| S00BJM.Bisulfite-Seq.DNA_Methylation.EGAX00001208469.cnag-blueprint-17_C3R02ACXX |