{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 45468756, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 40024237, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 88.03, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 44450083, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 43970094, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.92, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 33353382, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 11545223, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.346148
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 34188180, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7144839, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.208986
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 33352273, 
            "distinct_read_pairs": 22044196, 
            "one_read_pair": 14647485, 
            "two_read_pair": 4719763, 
            "NRF": 0.66095, 
            "PBC1": 0.66446, 
            "PBC2": 3.103437
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 34168122, 
            "distinct_read_pairs": 27206154, 
            "one_read_pair": 21562951, 
            "two_read_pair": 4583274, 
            "NRF": 0.796244, 
            "PBC1": 0.792576, 
            "PBC2": 4.704705
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 21808159, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21808159, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 27043341, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27043341, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 56373, 
        "Np": 0, 
        "N_opt": 56373, 
        "N_consv": 56373, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 205, 
            "corr_est_frag_len": 0.192401951556543, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.169887, 
            "argmin_corr": 1500, 
            "min_corr": 0.1444419, 
            "NSC": 1.332037, 
            "RSC": 1.884845
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.326787857477
        }, 
        "rep1-pr1": {
            "FRiP": 0.297255018129
        }, 
        "rep1-pr2": {
            "FRiP": 0.297859518326
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.276207250291
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.171903444446, 
            "auc": 0.488372222371, 
            "ch_div": 0.238315066357, 
            "elbow_pt": 1.58435387873e-62, 
            "jsd": 0.725217624267, 
            "syn_auc": 0.512074385284, 
            "syn_elbow_pt": 0.280858809978, 
            "syn_jsd": 0.407705899746
        }
    ]
}