/EXTERNAL BLUEPRINT/methylation/K006278_K006282_11_lane_gembs
BACK
SAMPLE K006278_K006282_11_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
26829092 |
19327771 |
72.04 % |
| NonRefCpG |
316770 |
144719 |
45.69 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
10633351 |
21.91 % |
7565946 |
18.93 % |
145270 |
26.37 % |
56891 |
16.69 % |
| Intermediate (0.3-0.7) |
11125694 |
22.92 % |
7904889 |
19.78 % |
148203 |
26.90 % |
79224 |
23.25 % |
| Methylated (0.7-1) |
26776322 |
55.17 % |
24488254 |
61.28 % |
257505 |
46.74 % |
204681 |
60.06 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.760 |
|
0.820 |
|
0.650 |
|
0.800 |
|