{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 57486402, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 54114089, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.13, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 41957651, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 41539492, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 33945363, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 11984788, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.353061
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 33191572, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 9524196, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.286946
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 33944117, 
            "distinct_read_pairs": 22226681, 
            "one_read_pair": 14384796, 
            "two_read_pair": 5282213, 
            "NRF": 0.654802, 
            "PBC1": 0.647186, 
            "PBC2": 2.723252
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 33166326, 
            "distinct_read_pairs": 23920327, 
            "one_read_pair": 17066233, 
            "two_read_pair": 5085574, 
            "NRF": 0.721223, 
            "PBC1": 0.713462, 
            "PBC2": 3.355813
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 21960575, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21960575, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 23667376, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23667376, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 41428, 
        "Np": 0, 
        "N_opt": 41428, 
        "N_consv": 41428, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 165, 
            "corr_est_frag_len": 0.197006191784193, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.2294763, 
            "argmin_corr": 1500, 
            "min_corr": 0.17751, 
            "NSC": 1.109832, 
            "RSC": 0.3751697
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0964676758536
        }, 
        "rep1-pr1": {
            "FRiP": 0.0974300667329
        }, 
        "rep1-pr2": {
            "FRiP": 0.097470422076
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0412789447768
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.240853074796, 
            "auc": 0.488413720754, 
            "ch_div": 0.187586719822, 
            "elbow_pt": 5.53166383593e-63, 
            "jsd": 0.604711560377, 
            "syn_auc": 0.510087805989, 
            "syn_elbow_pt": 0.0996102561106, 
            "syn_jsd": 0.280564651914
        }
    ]
}