{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 30494294, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 29777708, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.65, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 22703396, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22040375, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.08, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 24655496, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 13526788, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.548632
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 17196797, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7750832, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.450714
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 24650440, 
            "distinct_read_pairs": 12231010, 
            "one_read_pair": 5815654, 
            "two_read_pair": 3194031, 
            "NRF": 0.496178, 
            "PBC1": 0.475484, 
            "PBC2": 1.820788
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 17178377, 
            "distinct_read_pairs": 9587001, 
            "one_read_pair": 5336205, 
            "two_read_pair": 2317395, 
            "NRF": 0.558085, 
            "PBC1": 0.556608, 
            "PBC2": 2.302674
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 11128708, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 11128708, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 9445965, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 9445965, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 47787, 
        "Np": 0, 
        "N_opt": 47787, 
        "N_consv": 47787, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.205616194326134, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1726858, 
            "argmin_corr": 1500, 
            "min_corr": 0.1256962, 
            "NSC": 1.635818, 
            "RSC": 1.700803
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.427424808199
        }, 
        "rep1-pr1": {
            "FRiP": 0.442384438318
        }, 
        "rep1-pr2": {
            "FRiP": 0.442717513651
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.410621939545
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.108000652829, 
            "auc": 0.483723786383, 
            "ch_div": 0.444335371291, 
            "elbow_pt": 1.61697086265e-31, 
            "jsd": 0.748409553475, 
            "syn_auc": 0.519920583678, 
            "syn_elbow_pt": 0.36768164076, 
            "syn_jsd": 0.477275266057
        }
    ]
}
