{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 43097900, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 42552869, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.74, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 39044925, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 38694722, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.1, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 34359779, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3128433, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.091049
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 30937450, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 6466573, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.209021
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 34359164, 
            "distinct_read_pairs": 31350081, 
            "one_read_pair": 28636584, 
            "two_read_pair": 2487989, 
            "NRF": 0.912423, 
            "PBC1": 0.913445, 
            "PBC2": 11.509932
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 30926519, 
            "distinct_read_pairs": 24655280, 
            "one_read_pair": 19592758, 
            "two_read_pair": 4102477, 
            "NRF": 0.797221, 
            "PBC1": 0.794668, 
            "PBC2": 4.775836
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 31231346, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 31231346, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 24470877, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 24470877, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 26682, 
        "Np": 0, 
        "N_opt": 26682, 
        "N_consv": 26682, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.177677882260809, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1834182, 
            "argmin_corr": 1500, 
            "min_corr": 0.1652613, 
            "NSC": 1.075133, 
            "RSC": 0.6838506
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.10898214817
        }, 
        "rep1-pr1": {
            "FRiP": 0.116868653141
        }, 
        "rep1-pr2": {
            "FRiP": 0.11711143377
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.105116029197
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.281600063835, 
            "auc": 0.490278038227, 
            "ch_div": 0.133315606169, 
            "elbow_pt": 6.79712708874e-90, 
            "jsd": 0.593117595077, 
            "syn_auc": 0.499878167244, 
            "syn_elbow_pt": 0.136128402879, 
            "syn_jsd": 0.261983962382
        }
    ]
}
