{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 46771610, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 44447382, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.03, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 55361026, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 54866758, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.11, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 36199194, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2150278, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.059401
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 43889262, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1974930, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.044998
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 36198690, 
            "distinct_read_pairs": 34100041, 
            "one_read_pair": 32130627, 
            "two_read_pair": 1861506, 
            "NRF": 0.942024, 
            "PBC1": 0.942246, 
            "PBC2": 17.260555
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 43859229, 
            "distinct_read_pairs": 41931328, 
            "one_read_pair": 40140060, 
            "two_read_pair": 1718772, 
            "NRF": 0.956043, 
            "PBC1": 0.957281, 
            "PBC2": 23.353918
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 34048916, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34048916, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 41914332, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 41914332, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 96104, 
        "Np": 0, 
        "N_opt": 96104, 
        "N_consv": 96104, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 210, 
            "corr_est_frag_len": 0.188962211588973, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1915551, 
            "argmin_corr": 1500, 
            "min_corr": 0.1835466, 
            "NSC": 1.029506, 
            "RSC": 0.6762306
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.449035324549
        }, 
        "rep1-pr1": {
            "FRiP": 0.404283003107
        }, 
        "rep1-pr2": {
            "FRiP": 0.404570417105
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.402583806615
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.174507337554, 
            "auc": 0.490695651631, 
            "ch_div": 0.171633584978, 
            "elbow_pt": 2.97674963035e-98, 
            "jsd": 0.785915357794, 
            "syn_auc": 0.517397177781, 
            "syn_elbow_pt": 0.312374530389, 
            "syn_jsd": 0.431131062963
        }
    ]
}
