{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 45505571, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 44483467, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.75, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 42480150, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 40714424, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.84, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 37138289, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 18878124, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.50832
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 31636810, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 15250332, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.482044
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 37136122, 
            "distinct_read_pairs": 18626428, 
            "one_read_pair": 9007866, 
            "two_read_pair": 4861735, 
            "NRF": 0.501572, 
            "PBC1": 0.483607, 
            "PBC2": 1.852809
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 31613455, 
            "distinct_read_pairs": 16842113, 
            "one_read_pair": 9244137, 
            "two_read_pair": 3828450, 
            "NRF": 0.532751, 
            "PBC1": 0.54887, 
            "PBC2": 2.41459
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 18260165, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 18260165, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 16386478, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 16386478, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 107814, 
        "Np": 0, 
        "N_opt": 107814, 
        "N_consv": 107814, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 190, 
            "corr_est_frag_len": 0.165109183274634, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1453745, 
            "argmin_corr": 1500, 
            "min_corr": 0.1300016, 
            "NSC": 1.270055, 
            "RSC": 2.283733
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.414915130036
        }, 
        "rep1-pr1": {
            "FRiP": 0.409009420503
        }, 
        "rep1-pr2": {
            "FRiP": 0.408518158881
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.380365088988
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.137859784044, 
            "auc": 0.487311740498, 
            "ch_div": 0.308948485927, 
            "elbow_pt": 2.31460081091e-52, 
            "jsd": 0.74922726891, 
            "syn_auc": 0.498046766407, 
            "syn_elbow_pt": 0.298706534926, 
            "syn_jsd": 0.44848953379
        }
    ]
}