{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 38721743, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36397167, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 38690123, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 37924148, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.02, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 29160976, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 8806893, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.30201
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 33605508, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 11929282, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.35498
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 29160226, 
            "distinct_read_pairs": 20505626, 
            "one_read_pair": 14233596, 
            "two_read_pair": 4529347, 
            "NRF": 0.703205, 
            "PBC1": 0.694131, 
            "PBC2": 3.142527
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 33571595, 
            "distinct_read_pairs": 22057727, 
            "one_read_pair": 14263150, 
            "two_read_pair": 5262609, 
            "NRF": 0.657035, 
            "PBC1": 0.646628, 
            "PBC2": 2.710281
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 20354083, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 20354083, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 21676226, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21676226, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 32786, 
        "Np": 0, 
        "N_opt": 32786, 
        "N_consv": 32786, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.164567326315026, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1502301, 
            "argmin_corr": 1500, 
            "min_corr": 0.1403859, 
            "NSC": 1.17225, 
            "RSC": 2.456405
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0956373020464
        }, 
        "rep1-pr1": {
            "FRiP": 0.079444221497
        }, 
        "rep1-pr2": {
            "FRiP": 0.0794113112518
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0342102063151
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.247598369272, 
            "auc": 0.487963525623, 
            "ch_div": 0.18331620596, 
            "elbow_pt": 2.72944458746e-58, 
            "jsd": 0.618482767997, 
            "syn_auc": 0.506473501374, 
            "syn_elbow_pt": 0.0827697857632, 
            "syn_jsd": 0.268471997911
        }
    ]
}