{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 47594255, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23609415, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 49.61, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 31301457, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 31001322, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.04, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 18923866, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 11945649, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.631248
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 24994810, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3887726, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.155541
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 18919223, 
            "distinct_read_pairs": 7292085, 
            "one_read_pair": 2638127, 
            "two_read_pair": 1741199, 
            "NRF": 0.385433, 
            "PBC1": 0.36178, 
            "PBC2": 1.515121
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 24984782, 
            "distinct_read_pairs": 21211685, 
            "one_read_pair": 17987265, 
            "two_read_pair": 2768979, 
            "NRF": 0.848984, 
            "PBC1": 0.847989, 
            "PBC2": 6.495992
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 6978217, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 6978217, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 21107084, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21107084, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 94068, 
        "Np": 0, 
        "N_opt": 94068, 
        "N_consv": 94068, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 175, 
            "corr_est_frag_len": 0.121250957381946, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.08434251, 
            "argmin_corr": 1500, 
            "min_corr": 0.07879549, 
            "NSC": 1.538806, 
            "RSC": 7.653745
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.294759439754
        }, 
        "rep1-pr1": {
            "FRiP": 0.305905850292
        }, 
        "rep1-pr2": {
            "FRiP": 0.305199192834
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.182065062368
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.127249246851, 
            "auc": 0.479419441336, 
            "ch_div": 0.528769988044, 
            "elbow_pt": 1.68876126947e-19, 
            "jsd": 0.760749259258, 
            "syn_auc": 0.532975238489, 
            "syn_elbow_pt": 0.181554370077, 
            "syn_jsd": 0.305478198581
        }
    ]
}
