{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 55300492, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 45490982, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 82.26, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 32359843, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 31827638, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.36, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 36059388, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 18829067, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.522168
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 25207203, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 8268422, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.328018
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 36058405, 
            "distinct_read_pairs": 17686987, 
            "one_read_pair": 8266371, 
            "two_read_pair": 4692299, 
            "NRF": 0.490509, 
            "PBC1": 0.46737, 
            "PBC2": 1.761689
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 25168507, 
            "distinct_read_pairs": 17123363, 
            "one_read_pair": 11507804, 
            "two_read_pair": 3893090, 
            "NRF": 0.680349, 
            "PBC1": 0.672053, 
            "PBC2": 2.955956
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 17230321, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 17230321, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 16938781, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 16938781, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 36576, 
        "Np": 0, 
        "N_opt": 36576, 
        "N_consv": 36576, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 195, 
            "corr_est_frag_len": 0.147338900495571, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.1303238, 
            "argmin_corr": 1500, 
            "min_corr": 0.1205956, 
            "NSC": 1.221761, 
            "RSC": 2.749051
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.073907121998
        }, 
        "rep1-pr1": {
            "FRiP": 0.109677125042
        }, 
        "rep1-pr2": {
            "FRiP": 0.109698947662
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0427927080874
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.224784959111, 
            "auc": 0.486917329232, 
            "ch_div": 0.235635998672, 
            "elbow_pt": 3.35524999551e-49, 
            "jsd": 0.594073262505, 
            "syn_auc": 0.510546025914, 
            "syn_elbow_pt": 0.0966492837748, 
            "syn_jsd": 0.279410621982
        }
    ]
}