{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 67464552, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 57462242, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 85.17, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 38352648, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 37706396, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.31, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 47745215, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 34926415, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.731517
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 30133472, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3979548, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.132064
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 47737382, 
            "distinct_read_pairs": 15089525, 
            "one_read_pair": 6089784, 
            "two_read_pair": 2551634, 
            "NRF": 0.316095, 
            "PBC1": 0.403577, 
            "PBC2": 2.386621
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 30131017, 
            "distinct_read_pairs": 26252164, 
            "one_read_pair": 22872201, 
            "two_read_pair": 2981448, 
            "NRF": 0.871267, 
            "PBC1": 0.87125, 
            "PBC2": 7.671508
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 12818800, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 12818800, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 26153924, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26153924, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 44262, 
        "Np": 0, 
        "N_opt": 44262, 
        "N_consv": 44262, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 175, 
            "corr_est_frag_len": 0.196418980120478, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.147111, 
            "argmin_corr": 1500, 
            "min_corr": 0.1079125, 
            "NSC": 1.820169, 
            "RSC": 2.257906
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.41940644633
        }, 
        "rep1-pr1": {
            "FRiP": 0.434836151973
        }, 
        "rep1-pr2": {
            "FRiP": 0.435105394924
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.40206845052
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.126697624578, 
            "auc": 0.484725862214, 
            "ch_div": 0.383176654524, 
            "elbow_pt": 6.96270961023e-36, 
            "jsd": 0.807353041142, 
            "syn_auc": 0.511016386685, 
            "syn_elbow_pt": 0.382766142941, 
            "syn_jsd": 0.463644550999
        }
    ]
}