{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 28862817, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27858828, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.52, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 44889430, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 44125133, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.3, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 23719966, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1966071, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.082887
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 35166445, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 565376, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.016077
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 23719883, 
            "distinct_read_pairs": 21758909, 
            "one_read_pair": 19954600, 
            "two_read_pair": 1662874, 
            "NRF": 0.917328, 
            "PBC1": 0.917077, 
            "PBC2": 12.000067
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 35154683, 
            "distinct_read_pairs": 34604874, 
            "one_read_pair": 34111098, 
            "two_read_pair": 483260, 
            "NRF": 0.98436, 
            "PBC1": 0.985731, 
            "PBC2": 70.585395
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 21753895, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21753895, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 34601069, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34601069, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 97662, 
        "Np": 0, 
        "N_opt": 97662, 
        "N_consv": 97662, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 235, 
            "corr_est_frag_len": 0.207522721600351, 
            "phantom_peak": 45, 
            "corr_phantom_peak": 0.2041224, 
            "argmin_corr": 1500, 
            "min_corr": 0.1878927, 
            "NSC": 1.104475, 
            "RSC": 1.209509
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.575608126555
        }, 
        "rep1-pr1": {
            "FRiP": 0.549338644891
        }, 
        "rep1-pr2": {
            "FRiP": 0.548895554794
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.542817700193
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.108910864273, 
            "auc": 0.48851415175, 
            "ch_div": 0.352277407462, 
            "elbow_pt": 4.15877335298e-64, 
            "jsd": 0.819644763622, 
            "syn_auc": 0.490350301825, 
            "syn_elbow_pt": 0.392926628962, 
            "syn_jsd": 0.501118133497
        }
    ]
}