{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 48794504, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 42179154, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 86.44, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 50669704, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 50229536, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 99.13, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 32080292, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 8778411, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.273639
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 40347854, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4212355, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.104401
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 32078246, 
            "distinct_read_pairs": 23553509, 
            "one_read_pair": 17145067, 
            "two_read_pair": 4807113, 
            "NRF": 0.734252, 
            "PBC1": 0.72792, 
            "PBC2": 3.566604
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 40315837, 
            "distinct_read_pairs": 36248419, 
            "one_read_pair": 32612364, 
            "two_read_pair": 3299153, 
            "NRF": 0.899111, 
            "PBC1": 0.899691, 
            "PBC2": 9.885072
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 23301881, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23301881, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 36135499, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 36135499, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 28584, 
        "Np": 0, 
        "N_opt": 28584, 
        "N_consv": 28584, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 180, 
            "corr_est_frag_len": 0.174988827305194, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.178117, 
            "argmin_corr": 1500, 
            "min_corr": 0.1591239, 
            "NSC": 1.099701, 
            "RSC": 0.8352996
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.139397425604
        }, 
        "rep1-pr1": {
            "FRiP": 0.14100356817
        }, 
        "rep1-pr2": {
            "FRiP": 0.14080976434
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.107383463991
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.246822929262, 
            "auc": 0.488749094254, 
            "ch_div": 0.169710940593, 
            "elbow_pt": 7.49073364738e-67, 
            "jsd": 0.58845321828, 
            "syn_auc": 0.510893840766, 
            "syn_elbow_pt": 0.154836513659, 
            "syn_jsd": 0.290818868241
        }
    ]
}