/cemt/A34409_3_lane_gembs/C46APANXX_7_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 478692394 | 100.00 % | 239346197 | 100.00 % | 239346197 | 100.00 % |
| General Reads | 471321658 | 98.46 % | 236586047 | 98.85 % | 234735611 | 98.07 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 31454 | 0.01 % | 15805 | 0.01 % | 15649 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 7339282 | 1.53 % | 2744345 | 1.15 % | 4594937 | 1.92 % |
| Bisulfite_reads C2T | 241039678 | 50.35 % | 120968835 | 50.54 % | 120070843 | 50.17 % |
| Bisulfite_reads G2A | 230313434 | 48.11 % | 115633017 | 48.31 % | 114680417 | 47.91 % |
| Concept | Value |
|---|---|
| Unique Fragments | 194871899 |
| Average Unique | 81.42 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 23971482926 | 39.74 % | 11311206396 | 37.51 % | 12660276530 | 41.98 % |
| Base Counts Overall C | 6010418406 | 9.97 % | 251321635 | 0.83 % | 5759096771 | 19.10 % |
| Base Counts Overall G | 6060416520 | 10.05 % | 5798746122 | 19.23 % | 261670398 | 0.87 % |
| Base Counts Overall T | 23776612213 | 39.42 % | 12556616171 | 41.64 % | 11219996042 | 37.20 % |
| Base Counts Overall N | 496311579 | 0.82 % | 239730498 | 0.79 % | 256581081 | 0.85 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.99373749556189 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 221312573 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 239346197 |
| 125 | 239346197 |
| Insert Size Histogram |
|---|
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