/cemt/A34409_3_lane_gembs/C62GPANXX_2_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 374731858 | 100.00 % | 187365929 | 100.00 % | 187365929 | 100.00 % |
| General Reads | 370739144 | 98.93 % | 185835837 | 99.18 % | 184903307 | 98.69 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 23556 | 0.01 % | 11821 | 0.01 % | 11735 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3969158 | 1.06 % | 1518271 | 0.81 % | 2450887 | 1.31 % |
| Bisulfite_reads C2T | 189393288 | 50.54 % | 94921797 | 50.66 % | 94471491 | 50.42 % |
| Bisulfite_reads G2A | 181369412 | 48.40 % | 90925861 | 48.53 % | 90443551 | 48.27 % |
| Concept | Value |
|---|---|
| Unique Fragments | 154567825 |
| Average Unique | 82.50 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 18771271895 | 39.76 % | 8875949358 | 37.60 % | 9895322537 | 41.91 % |
| Base Counts Overall C | 4687346255 | 9.93 % | 174671740 | 0.74 % | 4512674515 | 19.11 % |
| Base Counts Overall G | 4750779389 | 10.06 % | 4551474741 | 19.28 % | 199304648 | 0.84 % |
| Base Counts Overall T | 18631564653 | 39.46 % | 9818300471 | 41.59 % | 8813264182 | 37.33 % |
| Base Counts Overall N | 375251916 | 0.79 % | 187710744 | 0.80 % | 187541172 | 0.79 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9942100742142389 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 175149536 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 187365929 |
| 125 | 187365929 |
| Insert Size Histogram |
|---|
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