{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 59645638, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 56744741, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.14, 
            "paired": 59645638, 
            "paired_qc_failed": 0, 
            "read1": 29822819, 
            "read1_qc_failed": 0, 
            "read2": 29822819, 
            "read2_qc_failed": 0, 
            "paired_properly": 55368982, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 92.83, 
            "with_itself": 55998511, 
            "with_itself_qc_failed": 0, 
            "singletons": 746230, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.25, 
            "diff_chroms": 368032, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 39854584, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 37062784, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.0, 
            "paired": 39854584, 
            "paired_qc_failed": 0, 
            "read1": 19927292, 
            "read1_qc_failed": 0, 
            "read2": 19927292, 
            "read2_qc_failed": 0, 
            "paired_properly": 33407063, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 83.82, 
            "with_itself": 35838648, 
            "with_itself_qc_failed": 0, 
            "singletons": 1224136, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 3.07, 
            "diff_chroms": 1658864, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 24069384, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 384191, 
            "paired_opt_dupes": 14786, 
            "dupes_pct": 0.015962
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 13479178, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 344808, 
            "paired_opt_dupes": 7792, 
            "dupes_pct": 0.025581
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 24067281, 
            "distinct_read_pairs": 23683126, 
            "one_read_pair": 23304422, 
            "two_read_pair": 373328, 
            "NRF": 0.984038, 
            "PBC1": 0.98401, 
            "PBC2": 62.423451
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 13471162, 
            "distinct_read_pairs": 13126691, 
            "one_read_pair": 12789814, 
            "two_read_pair": 329426, 
            "NRF": 0.974429, 
            "PBC1": 0.974336, 
            "PBC2": 38.824543
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 47370386, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 47370386, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 47370386, 
            "paired_qc_failed": 0, 
            "read1": 23685193, 
            "read1_qc_failed": 0, 
            "read2": 23685193, 
            "read2_qc_failed": 0, 
            "paired_properly": 47370386, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 47370386, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 26268740, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26268740, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 26268740, 
            "paired_qc_failed": 0, 
            "read1": 13134370, 
            "read1_qc_failed": 0, 
            "read2": 13134370, 
            "read2_qc_failed": 0, 
            "paired_properly": 26268740, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 26268740, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 101083, 
        "Np": 0, 
        "N_opt": 101083, 
        "N_consv": 101083, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 215, 
            "corr_est_frag_len": 0.179641614082051, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1897046, 
            "argmin_corr": 1500, 
            "min_corr": 0.174259, 
            "NSC": 1.030889, 
            "RSC": 0.3484884
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.150835915833
        }, 
        "rep1-pr1": {
            "FRiP": 0.194510809088
        }, 
        "rep1-pr2": {
            "FRiP": 0.194114619835
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0984754926356
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.232093407599, 
            "auc": 0.494058889117, 
            "ch_div": 0.155043734693, 
            "elbow_pt": 5.77592077736e-243, 
            "jsd": 0.623303843655, 
            "syn_auc": 0.509323664322, 
            "syn_elbow_pt": 0.0657084231419, 
            "syn_jsd": 0.331630750933
        }
    ]
}