{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 50557058, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 45000617, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 89.01, 
            "paired": 50557058, 
            "paired_qc_failed": 0, 
            "read1": 25278529, 
            "read1_qc_failed": 0, 
            "read2": 25278529, 
            "read2_qc_failed": 0, 
            "paired_properly": 42564168, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 84.19, 
            "with_itself": 43766638, 
            "with_itself_qc_failed": 0, 
            "singletons": 1233979, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 2.44, 
            "diff_chroms": 322708, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 39854584, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 37062784, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.0, 
            "paired": 39854584, 
            "paired_qc_failed": 0, 
            "read1": 19927292, 
            "read1_qc_failed": 0, 
            "read2": 19927292, 
            "read2_qc_failed": 0, 
            "paired_properly": 33407063, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 83.82, 
            "with_itself": 35838648, 
            "with_itself_qc_failed": 0, 
            "singletons": 1224136, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 3.07, 
            "diff_chroms": 1658864, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 15511271, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 155508, 
            "paired_opt_dupes": 8898, 
            "dupes_pct": 0.010025
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 13479178, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 344808, 
            "paired_opt_dupes": 7792, 
            "dupes_pct": 0.025581
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 15510334, 
            "distinct_read_pairs": 15354836, 
            "one_read_pair": 15200985, 
            "two_read_pair": 152258, 
            "NRF": 0.989975, 
            "PBC1": 0.98998, 
            "PBC2": 99.83702
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 13471162, 
            "distinct_read_pairs": 13126691, 
            "one_read_pair": 12789814, 
            "two_read_pair": 329426, 
            "NRF": 0.974429, 
            "PBC1": 0.974336, 
            "PBC2": 38.824543
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 30711526, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 30711526, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 30711526, 
            "paired_qc_failed": 0, 
            "read1": 15355763, 
            "read1_qc_failed": 0, 
            "read2": 15355763, 
            "read2_qc_failed": 0, 
            "paired_properly": 30711526, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 30711526, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 26268740, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26268740, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 26268740, 
            "paired_qc_failed": 0, 
            "read1": 13134370, 
            "read1_qc_failed": 0, 
            "read2": 13134370, 
            "read2_qc_failed": 0, 
            "paired_properly": 26268740, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 26268740, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 145994, 
        "Np": 0, 
        "N_opt": 145994, 
        "N_consv": 145994, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 235, 
            "corr_est_frag_len": 0.21351758319788, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2565378, 
            "argmin_corr": 1500, 
            "min_corr": 0.1995355, 
            "NSC": 1.070073, 
            "RSC": 0.2452898
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.360775719128
        }, 
        "rep1-pr1": {
            "FRiP": 0.338463660569
        }, 
        "rep1-pr2": {
            "FRiP": 0.338663011445
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.257854854327
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.16155894902, 
            "auc": 0.492620713778, 
            "ch_div": 0.281152159049, 
            "elbow_pt": 5.85397185768e-157, 
            "jsd": 0.709653040742, 
            "syn_auc": 0.500492247512, 
            "syn_elbow_pt": 0.122376749722, 
            "syn_jsd": 0.405536144209
        }
    ]
}