/cemt/A34003_3_lane_gembs/C34B4ACXX_3_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 348522756 | 100.00 % | 174261378 | 100.00 % | 174261378 | 100.00 % |
| General Reads | 344529766 | 98.85 % | 172848266 | 99.19 % | 171681500 | 98.52 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 141535 | 0.04 % | 70942 | 0.04 % | 70593 | 0.04 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3851455 | 1.11 % | 1342170 | 0.77 % | 2509285 | 1.44 % |
| Bisulfite_reads C2T | 176308042 | 50.59 % | 88441542 | 50.75 % | 87866500 | 50.42 % |
| Bisulfite_reads G2A | 168363259 | 48.31 % | 84477666 | 48.48 % | 83885593 | 48.14 % |
| Concept | Value |
|---|---|
| Unique Fragments | 142270667 |
| Average Unique | 81.64 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 13846218398 | 39.33 % | 5572934877 | 31.66 % | 8273283521 | 47.01 % |
| Base Counts Overall C | 3595040844 | 10.21 % | 118787827 | 0.67 % | 3476253017 | 19.75 % |
| Base Counts Overall G | 3661922545 | 10.40 % | 3536618403 | 20.09 % | 125304142 | 0.71 % |
| Base Counts Overall T | 13742762574 | 39.04 % | 8195534634 | 46.56 % | 5547227940 | 31.52 % |
| Base Counts Overall N | 354853995 | 1.01 % | 176523437 | 1.00 % | 178330558 | 1.01 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9958376394964826 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 161738253 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 174261378 |
| 100 | 174261378 |
| Insert Size Histogram |
|---|
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