/cemt/A34003_3_lane_gembs/C34B4ACXX_4_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 347863546 | 100.00 % | 173931773 | 100.00 % | 173931773 | 100.00 % |
| General Reads | 343639305 | 98.79 % | 172399476 | 99.12 % | 171239829 | 98.45 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 140809 | 0.04 % | 70548 | 0.04 % | 70261 | 0.04 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4083432 | 1.17 % | 1461749 | 0.84 % | 2621683 | 1.51 % |
| Bisulfite_reads C2T | 175846280 | 50.55 % | 88210765 | 50.72 % | 87635515 | 50.38 % |
| Bisulfite_reads G2A | 167933834 | 48.28 % | 84259259 | 48.44 % | 83674575 | 48.11 % |
| Concept | Value |
|---|---|
| Unique Fragments | 141519819 |
| Average Unique | 81.37 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 13818659486 | 39.33 % | 5553893266 | 31.62 % | 8264766220 | 47.05 % |
| Base Counts Overall C | 3576818823 | 10.18 % | 117930903 | 0.67 % | 3458887920 | 19.69 % |
| Base Counts Overall G | 3642844815 | 10.37 % | 3518528792 | 20.03 % | 124316023 | 0.71 % |
| Base Counts Overall T | 13740607022 | 39.11 % | 8200168987 | 46.68 % | 5540438035 | 31.54 % |
| Base Counts Overall N | 355288000 | 1.01 % | 176587125 | 1.01 % | 178700875 | 1.02 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9958152540787409 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 161087732 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 173931773 |
| 100 | 173931773 |
| Insert Size Histogram |
|---|
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