/CEMT/A36011_3_lane_gembs/C6HT8ANXX_2_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 492433052 | 100.00 % | 246216526 | 100.00 % | 246216526 | 100.00 % |
| General Reads | 486003560 | 98.69 % | 243555509 | 98.92 % | 242448051 | 98.47 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 47478 | 0.01 % | 23771 | 0.01 % | 23707 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6382014 | 1.30 % | 2637246 | 1.07 % | 3744768 | 1.52 % |
| Bisulfite_reads C2T | 247846555 | 50.33 % | 124185230 | 50.44 % | 123661325 | 50.22 % |
| Bisulfite_reads G2A | 238204483 | 48.37 % | 119394050 | 48.49 % | 118810433 | 48.25 % |
| Concept | Value |
|---|---|
| Unique Fragments | 200976679 |
| Average Unique | 81.63 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 24679280078 | 39.78 % | 11029898870 | 35.55 % | 13649381208 | 44.00 % |
| Base Counts Overall C | 6101445187 | 9.83 % | 238947968 | 0.77 % | 5862497219 | 18.90 % |
| Base Counts Overall G | 6182849367 | 9.96 % | 5908755589 | 19.05 % | 274093778 | 0.88 % |
| Base Counts Overall T | 24590076024 | 39.63 % | 13598993513 | 43.83 % | 10991082511 | 35.43 % |
| Base Counts Overall N | 492913896 | 0.79 % | 246686336 | 0.80 % | 246227560 | 0.79 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9939028527506598 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 225188584 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 246216526 |
| 125 | 246216526 |
| Insert Size Histogram |
|---|
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