/CEMT/A36011_3_lane_gembs/C6HT8ANXX_3_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 489642350 | 100.00 % | 244821175 | 100.00 % | 244821175 | 100.00 % |
| General Reads | 483195901 | 98.68 % | 242149288 | 98.91 % | 241046613 | 98.46 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 47310 | 0.01 % | 23693 | 0.01 % | 23617 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6399139 | 1.31 % | 2648194 | 1.08 % | 3750945 | 1.53 % |
| Bisulfite_reads C2T | 246405030 | 50.32 % | 123465929 | 50.43 % | 122939101 | 50.22 % |
| Bisulfite_reads G2A | 236838181 | 48.37 % | 118707052 | 48.49 % | 118131129 | 48.25 % |
| Concept | Value |
|---|---|
| Unique Fragments | 199855173 |
| Average Unique | 81.63 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 24540055055 | 39.78 % | 10970431514 | 35.56 % | 13569623541 | 43.99 % |
| Base Counts Overall C | 6083749265 | 9.86 % | 240262371 | 0.78 % | 5843486894 | 18.94 % |
| Base Counts Overall G | 6150291134 | 9.97 % | 5877182916 | 19.05 % | 273108218 | 0.89 % |
| Base Counts Overall T | 24430680418 | 39.60 % | 13514279849 | 43.81 % | 10916400569 | 35.39 % |
| Base Counts Overall N | 490160228 | 0.79 % | 245311400 | 0.80 % | 244848828 | 0.79 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9938326573055917 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 223893658 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 244821175 |
| 125 | 244821175 |
| Insert Size Histogram |
|---|
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