{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 36431612, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 28865628, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 79.23, 
            "paired": 36431612, 
            "paired_qc_failed": 0, 
            "read1": 18215806, 
            "read1_qc_failed": 0, 
            "read2": 18215806, 
            "read2_qc_failed": 0, 
            "paired_properly": 27287953, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 74.9, 
            "with_itself": 27902416, 
            "with_itself_qc_failed": 0, 
            "singletons": 963212, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 2.64, 
            "diff_chroms": 470494, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 52208364, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 46961269, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 89.95, 
            "paired": 52208364, 
            "paired_qc_failed": 0, 
            "read1": 26104182, 
            "read1_qc_failed": 0, 
            "read2": 26104182, 
            "read2_qc_failed": 0, 
            "paired_properly": 38339710, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 73.44, 
            "with_itself": 44775897, 
            "with_itself_qc_failed": 0, 
            "singletons": 2185372, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 4.19, 
            "diff_chroms": 4612399, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 12068765, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 493953, 
            "paired_opt_dupes": 2709, 
            "dupes_pct": 0.040928
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 13624196, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 312822, 
            "paired_opt_dupes": 3040, 
            "dupes_pct": 0.022961
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 12067039, 
            "distinct_read_pairs": 11573175, 
            "one_read_pair": 11097092, 
            "two_read_pair": 458887, 
            "NRF": 0.959073, 
            "PBC1": 0.958863, 
            "PBC2": 24.182624
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 13619156, 
            "distinct_read_pairs": 13306524, 
            "one_read_pair": 13000280, 
            "two_read_pair": 300008, 
            "NRF": 0.977045, 
            "PBC1": 0.976985, 
            "PBC2": 43.333111
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 23149624, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 23149624, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 23149624, 
            "paired_qc_failed": 0, 
            "read1": 11574812, 
            "read1_qc_failed": 0, 
            "read2": 11574812, 
            "read2_qc_failed": 0, 
            "paired_properly": 23149624, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 23149624, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 26622748, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26622748, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 26622748, 
            "paired_qc_failed": 0, 
            "read1": 13311374, 
            "read1_qc_failed": 0, 
            "read2": 13311374, 
            "read2_qc_failed": 0, 
            "paired_properly": 26622748, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 26622748, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 26482, 
        "Np": 0, 
        "N_opt": 26482, 
        "N_consv": 26482, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 14844009, 
            "est_frag_len": 280, 
            "corr_est_frag_len": 0.434728595983175, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.3728104, 
            "argmin_corr": 1500, 
            "min_corr": 0.2033126, 
            "NSC": 2.138227, 
            "RSC": 1.365304
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.661501187012
        }, 
        "rep1-pr1": {
            "FRiP": 0.659650211835
        }, 
        "rep1-pr2": {
            "FRiP": 0.659640821092
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.652582804632
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0552678497296, 
            "auc": 0.491419131019, 
            "ch_div": 0.510438367448, 
            "elbow_pt": 9.84749879002e-116, 
            "jsd": 0.88036563276, 
            "syn_auc": 0.506074984457, 
            "syn_elbow_pt": 0.501881072197, 
            "syn_jsd": 0.642643332194
        }
    ]
}