/cemt/A34004_3_lane_gembs/C34B4ACXX_5_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 357199512 | 100.00 % | 178599756 | 100.00 % | 178599756 | 100.00 % |
| General Reads | 352319275 | 98.63 % | 176743257 | 98.96 % | 175576018 | 98.31 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 179579 | 0.05 % | 89982 | 0.05 % | 89597 | 0.05 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4700658 | 1.32 % | 1766517 | 0.99 % | 2934141 | 1.64 % |
| Bisulfite_reads C2T | 180238940 | 50.46 % | 90408542 | 50.62 % | 89830398 | 50.30 % |
| Bisulfite_reads G2A | 172259914 | 48.23 % | 86424697 | 48.39 % | 85835217 | 48.06 % |
| Concept | Value |
|---|---|
| Unique Fragments | 139753905 |
| Average Unique | 78.25 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 14125046171 | 39.15 % | 5439188702 | 30.15 % | 8685857469 | 48.15 % |
| Base Counts Overall C | 3705739281 | 10.27 % | 130529583 | 0.72 % | 3575209698 | 19.82 % |
| Base Counts Overall G | 3795960282 | 10.52 % | 3645808030 | 20.21 % | 150152252 | 0.83 % |
| Base Counts Overall T | 14086742838 | 39.05 % | 8642061757 | 47.91 % | 5444681081 | 30.18 % |
| Base Counts Overall N | 363662140 | 1.01 % | 180987284 | 1.00 % | 182674856 | 1.01 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9957104226057338 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 160474763 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 178599756 |
| 100 | 178599756 |
| Insert Size Histogram |
|---|
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