/cemt/A34004_3_lane_gembs/C34B4ACXX_6_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 360744566 | 100.00 % | 180372283 | 100.00 % | 180372283 | 100.00 % |
| General Reads | 356355697 | 98.78 % | 178759928 | 99.11 % | 177595769 | 98.46 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 182099 | 0.05 % | 91237 | 0.05 % | 90862 | 0.05 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 4206770 | 1.17 % | 1521118 | 0.84 % | 2685652 | 1.49 % |
| Bisulfite_reads C2T | 182333164 | 50.54 % | 91450367 | 50.70 % | 90882797 | 50.39 % |
| Bisulfite_reads G2A | 174204632 | 48.29 % | 87400798 | 48.46 % | 86803834 | 48.12 % |
| Concept | Value |
|---|---|
| Unique Fragments | 142206613 |
| Average Unique | 78.84 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 14289081570 | 39.22 % | 5524182797 | 30.32 % | 8764898773 | 48.11 % |
| Base Counts Overall C | 3754504067 | 10.30 % | 132681845 | 0.73 % | 3621822222 | 19.88 % |
| Base Counts Overall G | 3840206454 | 10.54 % | 3688096008 | 20.24 % | 152110446 | 0.83 % |
| Base Counts Overall T | 14184852537 | 38.93 % | 8689886023 | 47.70 % | 5494966514 | 30.16 % |
| Base Counts Overall N | 366556538 | 1.01 % | 182753910 | 1.00 % | 183802628 | 1.01 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9956051441232387 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 162771502 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 100 | 180372283 |
| 100 | 180372283 |
| Insert Size Histogram |
|---|
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