/cemt/A34407_3_lane_gembs/C46APANXX_5_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 473927990 | 100.00 % | 236963995 | 100.00 % | 236963995 | 100.00 % |
| General Reads | 466954799 | 98.53 % | 234329141 | 98.89 % | 232625658 | 98.17 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 27774 | 0.01 % | 13951 | 0.01 % | 13823 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6945417 | 1.47 % | 2620903 | 1.11 % | 4324514 | 1.82 % |
| Bisulfite_reads C2T | 238728437 | 50.37 % | 119780466 | 50.55 % | 118947971 | 50.20 % |
| Bisulfite_reads G2A | 228254136 | 48.16 % | 114562626 | 48.35 % | 113691510 | 47.98 % |
| Concept | Value |
|---|---|
| Unique Fragments | 193632025 |
| Average Unique | 81.71 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 23729362508 | 39.74 % | 11195199638 | 37.50 % | 12534162870 | 41.98 % |
| Base Counts Overall C | 5958610254 | 9.98 % | 249678256 | 0.84 % | 5708931998 | 19.12 % |
| Base Counts Overall G | 5972089355 | 10.00 % | 5730026022 | 19.19 % | 242063333 | 0.81 % |
| Base Counts Overall T | 23565313270 | 39.46 % | 12445157869 | 41.68 % | 11120155401 | 37.24 % |
| Base Counts Overall N | 489551353 | 0.82 % | 237401585 | 0.80 % | 252149768 | 0.84 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9926550204251061 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 219107132 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 236963995 |
| 125 | 236963995 |
| Insert Size Histogram |
|---|
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