{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 42955984, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 40774913, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.92, 
            "paired": 42955984, 
            "paired_qc_failed": 0, 
            "read1": 21477992, 
            "read1_qc_failed": 0, 
            "read2": 21477992, 
            "read2_qc_failed": 0, 
            "paired_properly": 39010974, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 90.82, 
            "with_itself": 40109579, 
            "with_itself_qc_failed": 0, 
            "singletons": 665334, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.55, 
            "diff_chroms": 631954, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 56322388, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 54322392, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.45, 
            "paired": 56322388, 
            "paired_qc_failed": 0, 
            "read1": 28161194, 
            "read1_qc_failed": 0, 
            "read2": 28161194, 
            "read2_qc_failed": 0, 
            "paired_properly": 50952662, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 90.47, 
            "with_itself": 53611780, 
            "with_itself_qc_failed": 0, 
            "singletons": 710612, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.26, 
            "diff_chroms": 1857685, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 16754213, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 87085, 
            "paired_opt_dupes": 1416, 
            "dupes_pct": 0.005198
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 22368630, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 147561, 
            "paired_opt_dupes": 1794, 
            "dupes_pct": 0.006597
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 16753362, 
            "distinct_read_pairs": 16666282, 
            "one_read_pair": 16579580, 
            "two_read_pair": 86326, 
            "NRF": 0.994802, 
            "PBC1": 0.994798, 
            "PBC2": 192.057781
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 22347851, 
            "distinct_read_pairs": 22200612, 
            "one_read_pair": 22054209, 
            "two_read_pair": 145570, 
            "NRF": 0.993411, 
            "PBC1": 0.993405, 
            "PBC2": 151.502432
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 33334256, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33334256, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 33334256, 
            "paired_qc_failed": 0, 
            "read1": 16667128, 
            "read1_qc_failed": 0, 
            "read2": 16667128, 
            "read2_qc_failed": 0, 
            "paired_properly": 33334256, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 33334256, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 44442138, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 44442138, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 44442138, 
            "paired_qc_failed": 0, 
            "read1": 22221069, 
            "read1_qc_failed": 0, 
            "read2": 22221069, 
            "read2_qc_failed": 0, 
            "paired_properly": 44442138, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 44442138, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 34370, 
        "Np": 0, 
        "N_opt": 34370, 
        "N_consv": 34370, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 250, 
            "corr_est_frag_len": 0.188920965052214, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1966126, 
            "argmin_corr": 1500, 
            "min_corr": 0.1772683, 
            "NSC": 1.065735, 
            "RSC": 0.6023817
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.141214849239
        }, 
        "rep1-pr1": {
            "FRiP": 0.12982277631
        }, 
        "rep1-pr2": {
            "FRiP": 0.128780672258
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0439941853858
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.192694146174, 
            "auc": 0.492901770065, 
            "ch_div": 0.311810866197, 
            "elbow_pt": 9.53352582518e-170, 
            "jsd": 0.619377217974, 
            "syn_auc": 0.510036530316, 
            "syn_elbow_pt": 0.0547343922763, 
            "syn_jsd": 0.323488341404
        }
    ]
}