/cemt/A36012_3_lane_gembs/C415FANXX_7_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 384500496 | 100.00 % | 192250248 | 100.00 % | 192250248 | 100.00 % |
| General Reads | 375943514 | 97.77 % | 189252186 | 98.44 % | 186691328 | 97.11 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 27138 | 0.01 % | 13655 | 0.01 % | 13483 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8529844 | 2.22 % | 2984407 | 1.55 % | 5545437 | 2.88 % |
| Bisulfite_reads C2T | 191108703 | 49.70 % | 96182576 | 50.03 % | 94926127 | 49.38 % |
| Bisulfite_reads G2A | 184861949 | 48.08 % | 93083265 | 48.42 % | 91778684 | 47.74 % |
| Concept | Value |
|---|---|
| Unique Fragments | 148813559 |
| Average Unique | 77.41 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 18951126052 | 39.12 % | 8440923546 | 34.85 % | 10510202506 | 43.39 % |
| Base Counts Overall C | 4805076540 | 9.92 % | 264093787 | 1.09 % | 4540982753 | 18.75 % |
| Base Counts Overall G | 4863285416 | 10.04 % | 4644763939 | 19.17 % | 218521477 | 0.90 % |
| Base Counts Overall T | 18965477024 | 39.15 % | 10680705921 | 44.09 % | 8284771103 | 34.20 % |
| Base Counts Overall N | 862097464 | 1.78 % | 193044055 | 0.80 % | 669053409 | 2.76 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9930825909795451 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 170642116 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 192250248 |
| 125 | 192250248 |
| Insert Size Histogram |
|---|
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