/cemt/A36012_3_lane_gembs/C6HT8ANXX_4_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 466580404 | 100.00 % | 233290202 | 100.00 % | 233290202 | 100.00 % |
| General Reads | 460902383 | 98.78 % | 231000093 | 99.02 % | 229902290 | 98.55 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 31487 | 0.01 % | 15779 | 0.01 % | 15708 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5646534 | 1.21 % | 2274330 | 0.97 % | 3372204 | 1.45 % |
| Bisulfite_reads C2T | 234255515 | 50.21 % | 117388378 | 50.32 % | 116867137 | 50.10 % |
| Bisulfite_reads G2A | 226678355 | 48.58 % | 113627494 | 48.71 % | 113050861 | 48.46 % |
| Concept | Value |
|---|---|
| Unique Fragments | 189793145 |
| Average Unique | 81.35 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 23334736866 | 39.69 % | 10243868175 | 34.85 % | 13090868691 | 44.53 % |
| Base Counts Overall C | 5838783857 | 9.93 % | 243584431 | 0.83 % | 5595199426 | 19.03 % |
| Base Counts Overall G | 5889009299 | 10.02 % | 5623806278 | 19.13 % | 265203021 | 0.90 % |
| Base Counts Overall T | 23258980365 | 39.56 % | 13049348459 | 44.39 % | 10209631906 | 34.73 % |
| Base Counts Overall N | 467620517 | 0.80 % | 233958109 | 0.80 % | 233662408 | 0.79 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9953226424758748 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 213736631 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 233290202 |
| 125 | 233290202 |
| Insert Size Histogram |
|---|
 |