/cemt/A36012_3_lane_gembs/C6HT8ANXX_5_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 470664844 | 100.00 % | 235332422 | 100.00 % | 235332422 | 100.00 % |
| General Reads | 464942885 | 98.78 % | 233026290 | 99.02 % | 231916595 | 98.55 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 32089 | 0.01 % | 16083 | 0.01 % | 16006 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5689870 | 1.21 % | 2290049 | 0.97 % | 3399821 | 1.44 % |
| Bisulfite_reads C2T | 236281773 | 50.20 % | 118406437 | 50.31 % | 117875336 | 50.09 % |
| Bisulfite_reads G2A | 228693201 | 48.59 % | 114635936 | 48.71 % | 114057265 | 48.47 % |
| Concept | Value |
|---|---|
| Unique Fragments | 191483754 |
| Average Unique | 81.37 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 23540312872 | 39.69 % | 10334513594 | 34.85 % | 13205799278 | 44.54 % |
| Base Counts Overall C | 5890242068 | 9.93 % | 244524093 | 0.82 % | 5645717975 | 19.04 % |
| Base Counts Overall G | 5942877594 | 10.02 % | 5675365399 | 19.14 % | 267512195 | 0.90 % |
| Base Counts Overall T | 23458972527 | 39.56 % | 13161622789 | 44.39 % | 10297349738 | 34.73 % |
| Base Counts Overall N | 471365283 | 0.79 % | 235859297 | 0.80 % | 235505986 | 0.79 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.99495179833808 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 215639261 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 235332422 |
| 125 | 235332422 |
| Insert Size Histogram |
|---|
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