/cemt/A34408_3_lane_gembs/C4154ANXX_6_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 446742330 | 100.00 % | 223371165 | 100.00 % | 223371165 | 100.00 % |
| General Reads | 440911875 | 98.69 % | 221197419 | 99.03 % | 219714456 | 98.36 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 52024 | 0.01 % | 26158 | 0.01 % | 25866 | 0.01 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5778431 | 1.29 % | 2147588 | 0.96 % | 3630843 | 1.63 % |
| Bisulfite_reads C2T | 225083289 | 50.38 % | 112905028 | 50.55 % | 112178261 | 50.22 % |
| Bisulfite_reads G2A | 215880610 | 48.32 % | 108318549 | 48.49 % | 107562061 | 48.15 % |
| Concept | Value |
|---|---|
| Unique Fragments | 180933356 |
| Average Unique | 81.00 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 22401650657 | 39.80 % | 10423691695 | 37.04 % | 11977958962 | 42.56 % |
| Base Counts Overall C | 5549775990 | 9.86 % | 213707631 | 0.76 % | 5336068359 | 18.96 % |
| Base Counts Overall G | 5629028704 | 10.00 % | 5379178390 | 19.11 % | 249850314 | 0.89 % |
| Base Counts Overall T | 22254490557 | 39.54 % | 11904289452 | 42.30 % | 10350201105 | 36.77 % |
| Base Counts Overall N | 454587672 | 0.81 % | 223899622 | 0.80 % | 230688050 | 0.82 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9934421993607477 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 204517013 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 125 | 223371165 |
| 125 | 223371165 |
| Insert Size Histogram |
|---|
 |